BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C10LP1|AL429549
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1729 0.0
>3x_Contig1752
Length = 22471
Score = 1729 bits (872), Expect = 0.0
Identities = 875/876 (99%)
Strand = Plus / Minus
Query: 1 gatcccactcgaagaaaatcactaccagctaacactcaaaagaacaaaattgacctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21226 gatcccactcgaagaaaatcactaccagctaacactcaaaagaacaaaattgacctaatt 21167
Query: 61 tttagttatttgctcacttttaccagtcgaatcttaccccaaactttaaacacaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21166 tttagttatttgctcacttttaccagtcgaatcttaccccaaactttaaacacaaatcca 21107
Query: 121 ataggtctgagttgtcaccttatttaaagaatcttgtcttttccctcctcaaaagctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21106 ataggtctgagttgtcaccttatttaaagaatcttgtcttttccctcctcaaaagctaaa 21047
Query: 181 tcgaaaaccaaaaaatctcgaagattcagatttagggttccacagaatgttacccggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21046 tcgaaaaccaaaaaatctcgaagattcagatttagggttccacagaatgttacccggtgt 20987
Query: 241 tagtgcaaaaccccacacaatactgctgcccgtgggggggaatacaaccgaccaggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20986 tagtgcaaaaccccacacaatactgctgcccgtgggggggaatacaaccgaccaggagga 20927
Query: 301 caaagcacatgcggaaggtattctgagttgtgacactagaaaccttttgtaagaacaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20926 caaagcacatgcggaaggtattctgagttgtgacactagaaaccttttgtaagaacaggg 20867
Query: 361 agcgtctgtaggttgtgagttaaatcaaggaacactttaaagtacattttggaaaatata 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 20866 agcgtctgtaggttgtgagtaaaatcaaggaacactttaaagtacattttggaaaatata 20807
Query: 421 tagggataatagaaacatgtatatatggaagtgtgtgttagttttagggattatattcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20806 tagggataatagaaacatgtatatatggaagtgtgtgttagttttagggattatattcca 20747
Query: 481 acagaaggtgatggctattctctaaaggagtgtgttagcatttttgatgctattagtatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20746 acagaaggtgatggctattctctaaaggagtgtgttagcatttttgatgctattagtatt 20687
Query: 541 acaatttgagaaaggaaggtagtgagtagttcggttcgtaacatgatagtattatcggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20686 acaatttgagaaaggaaggtagtgagtagttcggttcgtaacatgatagtattatcggag 20627
Query: 601 aagaagtaaatttcgtgattgccaatgaatttggtagaatatttttaggttattattctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20626 aagaagtaaatttcgtgattgccaatgaatttggtagaatatttttaggttattattctt 20567
Query: 661 ttcttttcttcacttagcttggtgacctttccttatttaactttgttttattcagttact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20566 ttcttttcttcacttagcttggtgacctttccttatttaactttgttttattcagttact 20507
Query: 721 gattaaaccatcctagttcttcagtgtctgcaatgcaccatgcaatgtctatgaactggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20506 gattaaaccatcctagttcttcagtgtctgcaatgcaccatgcaatgtctatgaactggg 20447
Query: 781 ccatcattatttcttgtggtgttattgccgtttggagaggtgctaaagaacttttcattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20446 ccatcattatttcttgtggtgttattgccgtttggagaggtgctaaagaacttttcattt 20387
Query: 841 tctgtttccacaatggtactgcatctatggttttgt 876
||||||||||||||||||||||||||||||||||||
Sbjct: 20386 tctgtttccacaatggtactgcatctatggttttgt 20351
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7674
Number of Sequences: 1807
Number of extensions: 7674
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)